{"id":963,"date":"2013-12-11T19:10:38","date_gmt":"2013-12-11T19:10:38","guid":{"rendered":"http:\/\/sites.miamioh.edu\/researchcomputing\/?page_id=963"},"modified":"2014-01-13T15:49:29","modified_gmt":"2014-01-13T15:49:29","slug":"qiime","status":"publish","type":"page","link":"https:\/\/sites.miamioh.edu\/researchcomputing\/qiime\/","title":{"rendered":"Qiime"},"content":{"rendered":"<p>Quantitative Insights Into Microbial Ecology<\/p>\n<p>Installation: get inst via git:<br \/>\n  104  mkdir qiime_software<br \/>\n  105  cd qiime_software\/<\/p>\n<p>  107  git clone git:\/\/github.com\/qiime\/qiime-deploy.git<br \/>\n  108  cd qiime-deploy<\/p>\n<p>  116  chmod a+rwx qiime-deploy-conf\/<\/p>\n<p>  120  rm -rf qiime-deploy*<br \/>\n  124  mv soft\/qiime-deploy .<br \/>\n  125  mv soft\/qiime-deploy-conf\/ \/<br \/>\n  126  mv soft\/qiime-deploy-conf\/ .<br \/>\n  131  cd qiime-deploy-conf\/<br \/>\n  133  cd ..\/qiime-deploy<br \/>\n  135  python qiime-deploy.py \/software\/qiime_software\/qiime_software\/ -f \/software\/qiime_software\/qiime-deploy-conf\/qiime-1.7.0\/qiime.conf &#8211;force-remove-failed-dirs<\/p>\n<p>to test:<br \/>\n 136  print_qiime_config.py -t<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Quantitative Insights Into Microbial Ecology Installation: get inst via git: 104 mkdir qiime_software 105 cd qiime_software\/ 107 git clone git:\/\/github.com\/qiime\/qiime-deploy.git 108 cd qiime-deploy 116 chmod a+rwx qiime-deploy-conf\/ 120 rm -rf qiime-deploy* 124 mv soft\/qiime-deploy . 125 mv soft\/qiime-deploy-conf\/ \/ 126 mv soft\/qiime-deploy-conf\/ . 131 cd qiime-deploy-conf\/ 133 cd ..\/qiime-deploy 135 python qiime-deploy.py \/software\/qiime_software\/qiime_software\/ -f \/software\/qiime_software\/qiime-deploy-conf\/qiime-1.7.0\/qiime.conf [&hellip;]<\/p>\n","protected":false},"author":31,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_bbp_topic_count":0,"_bbp_reply_count":0,"_bbp_total_topic_count":0,"_bbp_total_reply_count":0,"_bbp_voice_count":0,"_bbp_anonymous_reply_count":0,"_bbp_topic_count_hidden":0,"_bbp_reply_count_hidden":0,"_bbp_forum_subforum_count":0,"footnotes":""},"class_list":["post-963","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/pages\/963","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/users\/31"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/comments?post=963"}],"version-history":[{"count":1,"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/pages\/963\/revisions"}],"predecessor-version":[{"id":964,"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/pages\/963\/revisions\/964"}],"wp:attachment":[{"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/media?parent=963"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}