{"id":319,"date":"2012-04-19T16:43:08","date_gmt":"2012-04-19T16:43:08","guid":{"rendered":"http:\/\/blogs.muohio.edu\/researchcomputing\/?page_id=319"},"modified":"2014-01-13T15:49:26","modified_gmt":"2014-01-13T15:49:26","slug":"mddnmr","status":"publish","type":"page","link":"https:\/\/sites.miamioh.edu\/researchcomputing\/hpc-software\/mddnmr\/","title":{"rendered":"MDDNMR"},"content":{"rendered":"<p>MDDNMR is a tool for multi-spectral decomposition of NMR spectra.<\/p>\n<p>A module file is not available for MDDNMR. \u00a0To use the software:<\/p>\n<ul>\n<li>set MDD_NMR=\/software\/mddnmr\/mddnmr1.6<\/li>\n<li>add $MDD_NMR\/bin and $MDD_NMR\/com to your $PATH<\/li>\n<li>You also need to have a functional <a title=\"NMRPipe\" href=\"http:\/\/sites.miamioh.edu\/researchcomputing\/hpc-software\/nmrpipe\/\">nmrPipe<\/a> package available.<\/li>\n<\/ul>\n<p><strong>Website:<\/strong>\u00a0<a href=\"http:\/\/www.extend-nmr.eu\/mdd.html\">http:\/\/www.extend-nmr.eu\/mdd.html<\/a><\/p>\n<p><strong>Installed versions: \u00a0<\/strong>1.6_27Jan10<\/p>\n<p><strong>Acknowledgement: <\/strong>Requested:<\/p>\n<blockquote><p>please cite at least one of:<\/p>\n<ol>\n<li>Orekhov, V. Y.; Ibraghimov, I.; Billeter, M., Optimizing resolution in multidimensional NMR by three-way decomposition. J. Biomol. NMR 2003, 27, 165-173.<\/li>\n<li>Tugarinov, V.; Kay, L. E.; Ibraghimov, I.; Orekhov, V. Y., High-resolution four-dimensional H-1-C-13 NOE spectroscopy using methyl-TROSY, sparse data acquisition, and multidimensional decomposition. J. Am. Chem. Soc. 2005, 127, 2767-2775.<\/li>\n<li>Jaravine V, Ibraghimov I, Orekhov VY. Removal of a time barrier for high-resolution multi-dimensional NMR spectroscopy. Nature Methods, 2006, 3: 605-607.<\/li>\n<li>Luan T, V. Jaravine, A. Yee, C.H. Arrowsmith, and V.Y. Orekhov, Optimization of resolution and sensitivity of 4D NOESY using multi-dimensional decomposition. J. Biomol. NMR, 2005, 33: p. 1-14<\/li>\n<li>Jaravine V, Orekhov V. Targeted Acquisition for Real-Time NMR Spectroscopy J. Am. Chem. Soc. 2006, 128: 13421-13426.<\/li>\n<li>Jaravine V, Zhuravleva A, Permi P, Ibraghimov I, Orekhov VY. Hyperdimensional NMR spectroscopy with nonlinear sampling. J. Am. Chem. Soc. 2008, 130:3927-36.<\/li>\n<\/ol>\n<\/blockquote>\n<p><strong>Licensing:<\/strong>\u00a0 Limited to non-commercial use.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>MDDNMR is a tool for multi-spectral decomposition of NMR spectra. A module file is not available for MDDNMR. \u00a0To use the software: set MDD_NMR=\/software\/mddnmr\/mddnmr1.6 add $MDD_NMR\/bin and $MDD_NMR\/com to your $PATH You also need to have a functional nmrPipe package available. Website:\u00a0http:\/\/www.extend-nmr.eu\/mdd.html Installed versions: \u00a01.6_27Jan10 Acknowledgement: Requested: please cite at least one of: Orekhov, V. [&hellip;]<\/p>\n","protected":false},"author":22,"featured_media":0,"parent":36,"menu_order":0,"comment_status":"closed","ping_status":"open","template":"","meta":{"_bbp_topic_count":0,"_bbp_reply_count":0,"_bbp_total_topic_count":0,"_bbp_total_reply_count":0,"_bbp_voice_count":0,"_bbp_anonymous_reply_count":0,"_bbp_topic_count_hidden":0,"_bbp_reply_count_hidden":0,"_bbp_forum_subforum_count":0,"footnotes":""},"class_list":["post-319","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/pages\/319","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/users\/22"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/comments?post=319"}],"version-history":[{"count":5,"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/pages\/319\/revisions"}],"predecessor-version":[{"id":1063,"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/pages\/319\/revisions\/1063"}],"up":[{"embeddable":true,"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/pages\/36"}],"wp:attachment":[{"href":"https:\/\/sites.miamioh.edu\/researchcomputing\/wp-json\/wp\/v2\/media?parent=319"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}