Meme is a suite of motif based sequence analysis tools.
Also available as web-based tools.
Website: http://meme.nbcr.net/meme/intro.html
Installed versions: 4.3.0
Acknowledgement: Available – http://meme.nbcr.net/meme/doc/cite.html
Licensing: Restricted to non-commercial use and covered by copyright – http://meme.nbcr.net/meme/COPYRIGHT.html